chem
4 years agoObsolete server Makefile removed master
Milan Zamazal [Fri, 28 Nov 2014 14:55:53 +0000 (15:55 +0100)]
Obsolete server Makefile removed

4 years agoMoved from tap to tac
Milan Zamazal [Fri, 28 Nov 2014 10:39:42 +0000 (11:39 +0100)]
Moved from tap to tac

5 years agoPrivilegeManager no longer present in Firefox
Milan Zamazal [Wed, 5 Feb 2014 17:03:59 +0000 (18:03 +0100)]
PrivilegeManager no longer present in Firefox

8 years agoFurther initial focus changes to make it basically work in Firefox 3.6
Milan Zamazal [Tue, 24 Aug 2010 16:40:37 +0000 (18:40 +0200)]
Further initial focus changes to make it basically work in Firefox 3.6

8 years agoFocus the first property when choosing an element of the periodic table
Milan Zamazal [Tue, 24 Aug 2010 12:10:04 +0000 (14:10 +0200)]
Focus the first property when choosing an element of the periodic table

This makes focusing the element properties work in Firefox 3.6.

8 years agoDon't limit installation on any near maxVersion
Milan Zamazal [Mon, 23 Aug 2010 19:41:58 +0000 (21:41 +0200)]
Don't limit installation on any near maxVersion

9 years agoRemove MaxVersion constraint from the client origin
pdm [Mon, 13 Jul 2009 20:07:29 +0000 (20:07 +0000)]
Remove MaxVersion constraint from the client

9 years agoXUL client: Display correct number of neighbors for fragments
pdm [Wed, 6 May 2009 18:31:26 +0000 (18:31 +0000)]
XUL client: Display correct number of neighbors for fragments

9 years agoXUL client: Basic terms translated to Slovak
pdm [Thu, 12 Mar 2009 10:36:26 +0000 (10:36 +0000)]
XUL client: Basic terms translated to Slovak

9 years agoXUL client: Allow reading other than `file' URLs in brailchem_read_url
pdm [Thu, 12 Mar 2009 10:36:21 +0000 (10:36 +0000)]
XUL client: Allow reading other than `file' URLs in brailchem_read_url

10 years agoserver documentation fix
kosata [Fri, 19 Dec 2008 08:05:41 +0000 (08:05 +0000)]
server documentation fix

10 years agoserver documentation added
kosata [Fri, 19 Dec 2008 07:39:34 +0000 (07:39 +0000)]
server documentation added

10 years agoXUL client: Display non-bond relation again, fix neighbor counts
pdm [Thu, 18 Dec 2008 12:31:14 +0000 (12:31 +0000)]
XUL client: Display non-bond relation again, fix neighbor counts

10 years agonew test data
kosata [Thu, 18 Dec 2008 09:09:25 +0000 (09:09 +0000)]
new test data

10 years agonew schemata
kosata [Wed, 17 Dec 2008 14:17:27 +0000 (14:17 +0000)]
new schemata

10 years agonew test data added, small fix, XML schema added
kosata [Wed, 17 Dec 2008 07:33:33 +0000 (07:33 +0000)]
new test data added, small fix, XML schema added

10 years agoXUL client: Send HTTP request data as multipart/form-data
pdm [Fri, 12 Dec 2008 14:39:44 +0000 (14:39 +0000)]
XUL client: Send HTTP request data as multipart/form-data

10 years agoXUL client: Use binary input for reading files
pdm [Fri, 12 Dec 2008 09:45:45 +0000 (09:45 +0000)]
XUL client: Use binary input for reading files

10 years agotetrahedral stereochemistry support for SMILES input added
kosata [Wed, 10 Dec 2008 12:44:24 +0000 (12:44 +0000)]
tetrahedral stereochemistry support for SMILES input added

10 years agoXUL client: Don't change order in the lists of neighbors
pdm [Wed, 10 Dec 2008 12:00:56 +0000 (12:00 +0000)]
XUL client: Don't change order in the lists of neighbors

10 years agoSorting atoms disabled to make stereochemistry work
pdm [Wed, 10 Dec 2008 09:43:39 +0000 (09:43 +0000)]
Sorting atoms disabled to make stereochemistry work

10 years agoSlovak translation of help.html
pdm [Thu, 4 Dec 2008 13:47:38 +0000 (13:47 +0000)]
Slovak translation of help.html

10 years agoSlovak translation added
kosata [Tue, 25 Nov 2008 11:54:26 +0000 (11:54 +0000)]
Slovak translation added

10 years agoczech translation was updated
kosata [Thu, 20 Nov 2008 12:30:47 +0000 (12:30 +0000)]
czech translation was updated

10 years agoXUL client: Basic terms document added
pdm [Tue, 18 Nov 2008 18:10:34 +0000 (18:10 +0000)]
XUL client: Basic terms document added

10 years agoXUL client: Versions updated
pdm [Tue, 18 Nov 2008 18:09:24 +0000 (18:09 +0000)]
XUL client: Versions updated

10 years agoXUL client: Copyright information updated
pdm [Thu, 23 Oct 2008 16:21:41 +0000 (16:21 +0000)]
XUL client: Copyright information updated

10 years agoXUL client: Indicate stereochemistry information
pdm [Thu, 23 Oct 2008 16:15:35 +0000 (16:15 +0000)]
XUL client: Indicate stereochemistry information

10 years agoXUL client: Don't confuse special atom relations with bonds
pdm [Thu, 23 Oct 2008 16:15:30 +0000 (16:15 +0000)]
XUL client: Don't confuse special atom relations with bonds

10 years agoXUL client: Update Brailchem URL
pdm [Thu, 23 Oct 2008 16:15:26 +0000 (16:15 +0000)]
XUL client: Update Brailchem URL

10 years agoTest support for tetrahedral stereochemistry added
kosata [Wed, 22 Oct 2008 19:33:50 +0000 (19:33 +0000)]
Test support for tetrahedral stereochemistry added

10 years agoXUL client: Guess format only for file inputs
pdm [Wed, 22 Oct 2008 08:07:57 +0000 (08:07 +0000)]
XUL client: Guess format only for file inputs

10 years agoXUL client: Set molecule formats for file input
pdm [Wed, 22 Oct 2008 07:57:21 +0000 (07:57 +0000)]
XUL client: Set molecule formats for file input

10 years agoXUL client: Don't put extra `name' item into format menu
pdm [Wed, 22 Oct 2008 07:57:17 +0000 (07:57 +0000)]
XUL client: Don't put extra `name' item into format menu

10 years agofix of error introduced in the previous upload
kosata [Tue, 21 Oct 2008 14:06:17 +0000 (14:06 +0000)]
fix of error introduced in the previous upload

10 years agosmall fix
kosata [Tue, 21 Oct 2008 11:26:23 +0000 (11:26 +0000)]
small fix

10 years agoextensions attribute added to formats list
kosata [Tue, 21 Oct 2008 11:22:22 +0000 (11:22 +0000)]
extensions attribute added to formats list

10 years agoduplicit entry Molfile removed from the list of supported formats
kosata [Mon, 20 Oct 2008 10:26:13 +0000 (10:26 +0000)]
duplicit entry Molfile removed from the list of supported formats

10 years agoPortuguese translation of element group names was added
kosata [Fri, 17 Oct 2008 04:52:33 +0000 (04:52 +0000)]
Portuguese translation of element group names was added

10 years agoXUL client: Last missing pieces of Portuguese translation
pdm [Thu, 16 Oct 2008 17:52:39 +0000 (17:52 +0000)]
XUL client: Last missing pieces of Portuguese translation

10 years agoXUL client: Use Czech translation as a base of Slovak translation of the manual
pdm [Wed, 15 Oct 2008 08:53:23 +0000 (08:53 +0000)]
XUL client: Use Czech translation as a base of Slovak translation of the manual

10 years agoXUL client: Help for special atom and bond symbols added
pdm [Wed, 15 Oct 2008 08:53:18 +0000 (08:53 +0000)]
XUL client: Help for special atom and bond symbols added

10 years agoXUL client: Indicate parts of rings
pdm [Wed, 15 Oct 2008 08:53:14 +0000 (08:53 +0000)]
XUL client: Indicate parts of rings

10 years agoXUL client: MULTIPLICITY -> ATOM_MULTIPLICITY
pdm [Wed, 15 Oct 2008 08:53:10 +0000 (08:53 +0000)]
XUL client: MULTIPLICITY -> ATOM_MULTIPLICITY

10 years agomolecular multiplicity information added
kosata [Wed, 15 Oct 2008 06:12:32 +0000 (06:12 +0000)]
molecular multiplicity information added

10 years agoXUL client: Indicate multiplicity of atoms and aromatic bonds
pdm [Tue, 14 Oct 2008 21:57:12 +0000 (21:57 +0000)]
XUL client: Indicate multiplicity of atoms and aromatic bonds

10 years agoXUL client: Czech translation of the user manual
pdm [Tue, 14 Oct 2008 15:31:20 +0000 (15:31 +0000)]
XUL client: Czech translation of the user manual

10 years agoXUL client: Minor adjustments of the user manual
pdm [Tue, 14 Oct 2008 15:31:16 +0000 (15:31 +0000)]
XUL client: Minor adjustments of the user manual

10 years agomultiplicity support added
kosata [Tue, 14 Oct 2008 10:58:07 +0000 (10:58 +0000)]
multiplicity support added

10 years agosome additional data requested by testers were added
kosata [Tue, 14 Oct 2008 05:51:02 +0000 (05:51 +0000)]
some additional data requested by testers were added

10 years agoXUL client: Portuguese translations
pdm [Fri, 10 Oct 2008 18:10:35 +0000 (18:10 +0000)]
XUL client: Portuguese translations

10 years agoXUL client: Allow URLs in the molecule input box
pdm [Wed, 8 Oct 2008 17:32:21 +0000 (17:32 +0000)]
XUL client: Allow URLs in the molecule input box

10 years agoSmall adjustments in Portuguese versions of element names
kosata [Wed, 8 Oct 2008 10:04:55 +0000 (10:04 +0000)]
Small adjustments in Portuguese versions of element names

10 years agoPortuguese translation added
kosata [Wed, 8 Oct 2008 09:58:19 +0000 (09:58 +0000)]
Portuguese translation added

10 years agoXUL client: Garbage characters from Slovak translations removed
pdm [Tue, 7 Oct 2008 11:14:57 +0000 (11:14 +0000)]
XUL client: Garbage characters from Slovak translations removed

10 years agoXUL client: Add advice about using only trusted servers to the manual
pdm [Fri, 26 Sep 2008 15:45:45 +0000 (15:45 +0000)]
XUL client: Add advice about using only trusted servers to the manual

10 years agoXUL client: Help file moved to locale/
pdm [Fri, 26 Sep 2008 15:45:40 +0000 (15:45 +0000)]
XUL client: Help file moved to locale/

10 years agoXUL client: Add specifications for all supported languages to chrome.manifest
pdm [Fri, 26 Sep 2008 15:20:19 +0000 (15:20 +0000)]
XUL client: Add specifications for all supported languages to chrome.manifest

10 years agoXUL client: Forgotten garbage removed
pdm [Wed, 24 Sep 2008 15:42:19 +0000 (15:42 +0000)]
XUL client: Forgotten garbage removed

10 years agoXUL client: Slovak translation
pdm [Wed, 24 Sep 2008 15:23:35 +0000 (15:23 +0000)]
XUL client: Slovak translation

10 years agoXUL client: Protocol definition really added
pdm [Wed, 24 Sep 2008 15:23:27 +0000 (15:23 +0000)]
XUL client: Protocol definition really added

10 years agoXUL client: Make possible to invoke Brailchem from a web page
pdm [Wed, 24 Sep 2008 15:23:22 +0000 (15:23 +0000)]
XUL client: Make possible to invoke Brailchem from a web page

`brailchem' protocol created.

10 years agoXUL client: Attempt to make Brailchem URLs working again
pdm [Tue, 23 Sep 2008 17:49:14 +0000 (17:49 +0000)]
XUL client: Attempt to make Brailchem URLs working again

Support different formats and URL locations in the URLs.

10 years agoXUL client: Allow insertion of molecule data from a file
pdm [Tue, 23 Sep 2008 17:49:10 +0000 (17:49 +0000)]
XUL client: Allow insertion of molecule data from a file

10 years agoXUL client: Support entering molecules and reactions in different formats
pdm [Tue, 23 Sep 2008 17:49:04 +0000 (17:49 +0000)]
XUL client: Support entering molecules and reactions in different formats

10 years agoXUL client: Use POST method for sending requests
pdm [Tue, 23 Sep 2008 17:48:58 +0000 (17:48 +0000)]
XUL client: Use POST method for sending requests

Don't use components anymore, put server calls directly to chrome/content.

10 years agoWeb server: Allow POST method for all requests
pdm [Tue, 23 Sep 2008 17:48:51 +0000 (17:48 +0000)]
Web server: Allow POST method for all requests

10 years agoXUL client: Fragment highlighting added
pdm [Mon, 22 Sep 2008 12:41:14 +0000 (12:41 +0000)]
XUL client: Fragment highlighting added

10 years agoXUL client: Display fragment names again
pdm [Mon, 22 Sep 2008 12:41:10 +0000 (12:41 +0000)]
XUL client: Display fragment names again

10 years agolisting of supported format now available from the server
kosata [Mon, 22 Sep 2008 12:12:09 +0000 (12:12 +0000)]
listing of supported format now available from the server

10 years agoXUL client: Display atom charges
pdm [Fri, 19 Sep 2008 17:00:38 +0000 (17:00 +0000)]
XUL client: Display atom charges

10 years agoportugese translation of element names added to the detail_periodic_table.py
kosata [Fri, 19 Sep 2008 10:14:19 +0000 (10:14 +0000)]
portugese translation of element names added to the detail_periodic_table.py

10 years agoXUL client: Translation templates added for some languages
pdm [Wed, 17 Sep 2008 11:06:33 +0000 (11:06 +0000)]
XUL client: Translation templates added for some languages

10 years agoadded support for synonyms from the oasa structure database
kosata [Thu, 4 Sep 2008 05:09:11 +0000 (05:09 +0000)]
added support for synonyms from the oasa structure database

10 years agoXUL client: Add "go " in front of molecule links
pdm [Wed, 27 Aug 2008 18:08:38 +0000 (18:08 +0000)]
XUL client: Add "go " in front of molecule links

10 years agoXUL client: Focus proper element on return to reaction
pdm [Wed, 27 Aug 2008 18:08:34 +0000 (18:08 +0000)]
XUL client: Focus proper element on return to reaction

10 years agoXUL client: Ensure molecule names are set as current after following a reference
pdm [Wed, 27 Aug 2008 17:37:27 +0000 (17:37 +0000)]
XUL client: Ensure molecule names are set as current after following a reference

10 years agoXUL client: Molecule movement fixes
pdm [Wed, 27 Aug 2008 17:37:23 +0000 (17:37 +0000)]
XUL client: Molecule movement fixes

10 years agoXUL client: Clear status bar before moving to another object
pdm [Wed, 27 Aug 2008 17:37:18 +0000 (17:37 +0000)]
XUL client: Clear status bar before moving to another object

10 years agoXUL client: Jumping to atoms fixed
pdm [Wed, 27 Aug 2008 17:37:14 +0000 (17:37 +0000)]
XUL client: Jumping to atoms fixed

10 years agoXUL client: Make next/previous atom navigation work again
pdm [Wed, 27 Aug 2008 17:37:10 +0000 (17:37 +0000)]
XUL client: Make next/previous atom navigation work again

10 years agoXUL client: WAVs resynthesized using another voice
pdm [Tue, 26 Aug 2008 18:09:29 +0000 (18:09 +0000)]
XUL client: WAVs resynthesized using another voice

Additionally, 1s silence put in front of ready.wav

10 years agoXUL client: Play sounds on wait start and end
pdm [Mon, 25 Aug 2008 18:15:27 +0000 (18:15 +0000)]
XUL client: Play sounds on wait start and end

10 years agolocalization update
kosata [Thu, 19 Jun 2008 11:29:59 +0000 (11:29 +0000)]
localization update

10 years ago./server/src/ChangeLog
pdm [Wed, 18 Jun 2008 13:30:38 +0000 (13:30 +0000)]
./server/src/ChangeLog

10 years agoOrca: Don't say "label"
pdm [Wed, 18 Jun 2008 13:30:36 +0000 (13:30 +0000)]
Orca: Don't say "label"

10 years ago./server/src/ChangeLog
pdm [Wed, 18 Jun 2008 11:38:12 +0000 (11:38 +0000)]
./server/src/ChangeLog

10 years agoXUL client: Present element properties in a simple vbox instead of a grid
pdm [Wed, 18 Jun 2008 11:38:10 +0000 (11:38 +0000)]
XUL client: Present element properties in a simple vbox instead of a grid

10 years ago./server/src/ChangeLog
pdm [Tue, 17 Jun 2008 16:22:20 +0000 (16:22 +0000)]
./server/src/ChangeLog

10 years agoTweaks in Orca scripts
pdm [Tue, 17 Jun 2008 16:22:18 +0000 (16:22 +0000)]
Tweaks in Orca scripts

10 years ago./server/src/ChangeLog
pdm [Tue, 17 Jun 2008 11:17:33 +0000 (11:17 +0000)]
./server/src/ChangeLog

10 years agoREADME for Orca scripts added
pdm [Tue, 17 Jun 2008 11:17:31 +0000 (11:17 +0000)]
README for Orca scripts added

10 years ago./server/src/ChangeLog
pdm [Tue, 17 Jun 2008 11:17:26 +0000 (11:17 +0000)]
./server/src/ChangeLog

10 years agoOrca scripts updated for current version of Orca
pdm [Tue, 17 Jun 2008 11:17:24 +0000 (11:17 +0000)]
Orca scripts updated for current version of Orca

10 years agoServer: Fix in concatenation of molecule lists when retrieving molecules by name
pdm [Thu, 12 Jun 2008 08:49:26 +0000 (08:49 +0000)]
Server: Fix in concatenation of molecule lists when retrieving molecules by name

10 years agoXUL client: Report empty server response properly in the molecule browser
pdm [Wed, 11 Jun 2008 13:29:32 +0000 (13:29 +0000)]
XUL client: Report empty server response properly in the molecule browser

10 years agoXUL client: Typos in molecule browser Czech translations fixed
pdm [Mon, 2 Jun 2008 10:29:31 +0000 (10:29 +0000)]
XUL client: Typos in molecule browser Czech translations fixed

10 years agosmall fix
kosata [Tue, 27 May 2008 05:52:02 +0000 (05:52 +0000)]
small fix

10 years agosupport for cis-trans stereochemistry on double bonds added
kosata [Tue, 27 May 2008 05:47:26 +0000 (05:47 +0000)]
support for cis-trans stereochemistry on double bonds added

10 years agoopenbabel support added
kosata [Mon, 21 Apr 2008 10:23:03 +0000 (10:23 +0000)]
openbabel support added